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Limits of computability: the Halting Problem, undecidable and unrecognizable languages, reductions to prove undecidability. There are several different forms of parallel computing: bit-level, instruction level, data, and task parallelism. Topics: introduction to bioinformatics and computational biology, algorithms for alignment of biological sequences and structures, computing with strings, phylogenetic tree construction, hidden Markov models, basic structural computations on proteins, protein structure prediction, protein threading techniques, homology modeling, molecular dynamics and energy minimization, statistical analysis of 3D biological data, integration of data sources, knowledge representation and controlled terminologies for molecular biology, microarray analysis, machine learning (clustering and classification), and natural language text processing.

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Publisher: Addison Wesley;; 3 edition edition (2005)

ISBN: B003UT0242

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